报告题目:Exploring Spatial Omics with Machine Learning
报告时间:2024年6月20日 10:00
报告地点:菠菜导航网中心校区王湘浩楼A521
报 告 人:王珏鑫
报告人简介:
Dr. Wang is an Assistant Professor in the Department of BioHealth Informatics at Indiana University-Purdue University Indianapolis. He earned his PhD in Computer Science in Jilin University and finished his training in Bioinformatics at the University of Missouri. His research mainly focuses on developing computational methods to model single-cell and spatial transcriptomics data, and data analysis in kidney diseases, cancer, and nervous system diseases. His lab has been funded by NIH.
报告内容简介:
Emerging spatial omics provides unprecedented challenges and opportunities for bioinformatic research. Here I present three recent works in my lab: (1) BSP, a dimension-agnostic granularity-based spatially variable gene identification approach, and scBSP, a computational efficient implementation of BSP; (2) REGNN, an empowered graph neural networks for heterogeneous tissue architecture analysis in kidney; and (3) TrimNN, a triangulation structural motif neural network for identifying cell organization in spatial omics.
主办单位:十大菠菜导航网
菠菜导航网软件学院
菠菜导航网计算机科学技术研究所
符号计算与知识工程教育部重点实验室
仿真技术教育部重点实验室
网络技术及应用软件教育部工程研究中心
菠菜导航网国家级计算机实验教学示范中心